OpenMP in VASP: Threading and SIMD

Florian Wende (Korresp. Autor*in), Martijn Marsman, Jeongnim Kim, Fedor Vasilev, Zhengji Zhao, Thomas Steinke

Veröffentlichungen: Beitrag in FachzeitschriftArtikelPeer Reviewed

Abstract

The Vienna Ab initio Simulation Package (VASP) is a widely used electronic structure code that originally exploits process-level parallelism through the Message Passing Interface (MPI) for work distribution within and across nodes. Architectural changes of modern parallel processors urge programmers to address thread- and data-level parallelism as well to benefit most from the available compute resources within a node. We describe for VASP how to approach for an MPI + OpenMP parallelization including data-level parallelism through OpenMP SIMD constructs together with a generic high-level vector coding scheme. We can demonstrate an improved scalability of VASP and more than 20% gain over the MPI-only version as well as a 2x increased performance of collective operations using the multiple-endpoint MPI feature. The high-level vector coding scheme applied to VASP's general gradient approximation routine gives up 9x performance gain on AVX512 platforms with the Intel compiler.
OriginalspracheEnglisch
Aufsatznummere25851
Seitenumfang17
FachzeitschriftInternational Journal of Quantum Chemistry
Jahrgang119
Ausgabenummer12
Frühes Online-Datum19 Dez. 2018
DOIs
PublikationsstatusVeröffentlicht - 15 Juni 2019

ÖFOS 2012

  • 102022 Softwareentwicklung
  • 102023 Supercomputing
  • 103018 Materialphysik
  • 102009 Computersimulation

Fingerprint

Untersuchen Sie die Forschungsthemen von „OpenMP in VASP: Threading and SIMD“. Zusammen bilden sie einen einzigartigen Fingerprint.

Zitationsweisen