Polygenic Risk Score Simulation: A case study of sudden cardiovascular diseases derived from literature insights.

  • Jana Schwarzerova
  • , Lenka Piherova
  • , Petra Polakovicova
  • , Simona Guziurova
  • , Eva Kutilova
  • , Martina Adamova
  • , Alice Krebsova
  • , Valentine Provazník
  • , Wolfram Weckwerth
  • , Radka Sitkova

Veröffentlichungen: Beitrag in BuchBeitrag in KonferenzbandPeer Reviewed

Abstract

Sudden cardiovascular diseases, including sudden cardiac arrest (SCA) and myocardial infarction (MI), remain among the leading causes of mortality worldwide. This study employs synthetic data simulations to develop polygenic risk scores (PRS) for improved identification of individuals at elevated risk. Leveraging genetic and phenotypic information from established literature, we modeled associations between multiple single nucleotide polymorphisms (SNPs) and the risk of sudden cardiovascular diseases. Our case study demonstrated that individuals with higher PRS values have a significantly increased risk of SCA and MI, with SNPs such as LTA (252A>G) identified as notable contributors. Additionally, combining PRS with traditional cardiovascular risk factors, such as smoking and diabetes, improved predictive accuracy, underscoring the value of integrating genetic data with clinical variables. These findings highlight the cumulative effect of genetic predispositions in determining cardiovascular risk and suggest potential applications of PRS models in personalized medicine to enhance preventive strategiesWhile promising, the study recognizes limitations related to the use of synthetic data and the need for validation in diverse, real-world populations. Future research should focus on refining these models and exploring additional genetic markers to further improve prediction capabilities.
OriginalspracheEnglisch
Titel2024 IEEE International Conference on Bioinformatics and Biomedicine
Redakteure*innenMario Cannataro, Huiru Zheng, Lin Gao, Jianlin Cheng, Joao Luis de Miranda, Ester Zumpano, Xiaohua Hu, Young-Rae Cho, Taesung Park
Seiten5081-5088
Seitenumfang8
ISBN (elektronisch)9798350386226
DOIs
PublikationsstatusVeröffentlicht - 3 Dez. 2024
VeranstaltungInternational Conference on Bioinformatics and Biomedicine (BIBM) - Lisbon, Portugal
Dauer: 3 Dez. 20246 Dez. 2024
http://ieeebibm.org/BIBM2024

Publikationsreihe

ReiheIEEE International Conference on Bioinformatics and Biomedicine
ISSN2156-1125

Konferenz

KonferenzInternational Conference on Bioinformatics and Biomedicine (BIBM)
Land/GebietPortugal
OrtLisbon
Zeitraum3/12/246/12/24
Internetadresse

Fördermittel

Supported by Ministry of Health, Czech Republic - conceptual development of research organization (FNOs/2024) This article has been produced with the financial support of the European Union under the LERCO project number CZ.10.03.01/00/22\\-003/0000003 via the Operational Programme Just Transition.

UN SDGs

Dieser Output leistet einen Beitrag zu folgendem(n) Ziel(en) für nachhaltige Entwicklung

  1. SDG 3 – Gesundheit und Wohlergehen
    SDG 3 – Gesundheit und Wohlergehen

ÖFOS 2012

  • 305905 Medizinische Informatik

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