Research Group Bioinformatics and Computational Biology

Activities

Activities per year 2011 2016 2017 2019 2022 2024

• 84 Talk or oral contribution
• 54 Poster presentation
• 8 Participation in ...
• 2 Organisation of ...
• 1 More
  • 1 Publication peer-review

Activities per year

Search results

• Structure and Design of RNase resistant RNA structures

  Leonhard Paul Sidl (Speaker) & Ivo Hofacker (Contributor)

  19 Feb 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• The effect of modified nucleotides on RNA structure

  Yuliia Varenyk (Speaker), Ronny Lorenz (Contributor), Thomas Spicher (Contributor) & Ivo Hofacker (Contributor)

  11 Feb 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Designing RNase-resistant Riboswitches

  Leonhard Paul Sidl (Speaker)

  11 Feb 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Free energy calculation of modified nucleotides by molecular dynamics simulations

  Thomas Spicher (Speaker), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  11 Feb 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Exoribonuclease-resistant RNAs in tick-borne flaviviruses

  Leonhard Paul Sidl (Contributor), Denis Skibinski (Contributor), Hua-Ting Yao (Contributor) & Michael Thomas Wolfinger (Contributor)

  11 Feb 2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• Structural Consequences of RNA Modifications

  Hamid Reza Mansouri Khosravi (Contributor), Thomas Spicher (Contributor), Ronny Lorenz (Contributor), Ivo Hofacker (Contributor) & Michael F. Jantsch (Contributor)

  1 Feb 2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• The effect of modified nucleotides on RNA structure

  Yuliia Varenyk (Speaker), Ronny Lorenz (Contributor), Thomas Spicher (Contributor) & Ivo Hofacker (Contributor)

  1 Feb 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Free energy calculation of modified nucleotides by molecular dynamics simulations

  Thomas Spicher (Contributor), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  1 Feb 2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• Single-cell RNA sequencing and phylogenetic inference

  Arndt von Haeseler (Speaker)

  10 Nov 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• scRNA-seq & Phylogenetic Inference

  Arndt von Haeseler (Speaker)

  17 Oct 2023 → 23 Oct 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Predicting early mortality of septic patients from a multi centric study within the first day after ICU admission

  Jan Müller (Speaker) & Arndt von Haeseler (Speaker)

  11 Sep 2023 → 13 Sep 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• From scRNA-seq count matrices to phylogenetic inference: Rethinking the problem of lineage reconstruction

  Julia Naas (Speaker), Christiane Elgert (Speaker) & Arndt von Haeseler (Speaker)

  1 Sep 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• How much phylogenetic information is in a branch? Satute gives an answer

  Cassius Manuel (Speaker) & Arndt von Haeseler (Speaker)

  23 Jul 2023 → 25 Jul 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• Theoretical Studies on Musashi-1 RNA Binding Protein

  Karl Peter Wolschann (Speaker), Thanyada Rungrotmongkol (Contributor), Nitchakan Darai (Contributor) & Michael Thomas Wolfinger (Contributor)

  5 Jun 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Structural Consequences of RNA Modifications

  Hamid Reza Mansouri Khosravi (Contributor), Ronny Lorenz (Contributor), Kasra Honarmand Tamizkar (Contributor), Ivo Hofacker (Contributor) & Michael F. Jantsch (Contributor)

  27 Apr 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• Modified nucleotides in RNA structure prediction

  Thomas Spicher (Contributor), Yuliia Varenyk (Contributor), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  27 Apr 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• The effect of modified nucleotides on secondary structure prediction in tRNA

  Yuliia Varenyk (Speaker), Ivo Hofacker (Contributor), Ronny Lorenz (Contributor) & Thomas Spicher (Contributor)

  12 Feb 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modeling RNA-RNA interaction formation on direct paths

  Maria Waldl (Speaker), Ivo Hofacker (Contributor) & Sebastian Will (Contributor)

  12 Feb 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Computational Estimation of Energy Parameters

  Thomas Spicher (Speaker), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  12 Feb 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Computational Estimation of Energy Parameters for RNA folding

  Thomas Spicher (Contributor), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  26 Oct 2022

  Activity: Talks and presentations › Poster presentation › Science to Science

• Analysis of modified nucleotides' constraints in the secondary structure prediction of tRNA

  Yuliia Varenyk (Contributor), Ivo Hofacker (Contributor), Ronny Lorenz (Contributor) & Thomas Spicher (Contributor)

  26 Oct 2022

  Activity: Talks and presentations › Poster presentation › Science to Science

• Challenges in the computational sequencing analysis of large tRNA genomes: tRNA abundance and modification dynamics

  Maria Waldl (Contributor), Tom Rappol (Contributor), Elisa Vilardo (Contributor) & Ivo Hofacker (Contributor)

  26 Oct 2022

  Activity: Talks and presentations › Poster presentation › Science to Science

• Predicting the effect of modified nucleotides on RNA structure

  Ivo Hofacker (Invited speaker)

  26 Oct 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Understanding Stem Cell Growth Dynamics in Human Cerebral Organoids

  Simon Emanuel Haendeler (Speaker), Christopher Esk (Contributor), Dominik Lindenhofer (Contributor), Florian Pflug (Contributor), Arndt von Haeseler (Contributor) & Juergen A. Knoblich (Contributor)

  11 Oct 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Phylogeny and artificial neural networks

  Alina Leuchtenberger (Speaker), Stephen Crotty (Contributor), Tamara Drucks (Contributor), Heiko Andreas Schmidt (Contributor), Sebastian Burgstaller-Muehlbacher (Contributor) & Arndt von Haeseler (Contributor)

  9 Oct 2022

  Activity: Talks and presentations › Poster presentation › Science to Science

• Incongruent Evolution of RNA Sequence and Structure

  Maria Waldl (Speaker), Sebastian Will (Contributor), Michael Thomas Wolfinger (Contributor), Ivo Hofacker (Contributor) & Peter Stadler (Contributor)

  3 Oct 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Computational Estimation of Energy Parameters for modified Nucleotides

  Thomas Spicher (Speaker), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  3 Oct 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modified nucleotides in RNA secondary structure prediction

  Yuliia Varenyk (Speaker), Ivo Hofacker (Contributor), Ronny Lorenz (Contributor) & Thomas Spicher (Contributor)

  3 Oct 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Experiments in Deep Learning for RNA Secondary Structure Prediction

  Ivo Hofacker (Invited speaker)

  18 Sep 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Simulations of cotranscriptional folding explain the impact of sequence mutations

  Stefan Badelt (Speaker), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  18 Sep 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Features of RNA-RNA interaction kinetics

  Maria Waldl (Speaker), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  18 Sep 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Experiments in Deep Learning for RNA Secondary Structure Prediction

  Ivo Hofacker (Keynote speaker)

  6 Sep 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Phylogeny and artificial neural networks

  Alina Leuchtenberger (Speaker), Stephen Crotty (Contributor), Tamara Drucks (Contributor), Heiko Andreas Schmidt (Contributor), Sebastian Burgstaller-Muehlbacher (Contributor) & Arndt von Haeseler (Contributor)

  23 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• RNA structuredness of viral genomes

  Michael Thomas Wolfinger (Speaker)

  12 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• An RNA kinetics ansatz derived from an efficient prediction of RNA pathways

  Ivo Hofacker (Invited speaker)

  7 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modeling RNA-RNA interaction formation on direct paths

  Maria Waldl (Speaker), Irene Katharina Beckmann-Schneider (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  7 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Incongruent Evolution of RNA Sequence and Structure

  Maria Waldl (Speaker), Sebastian Will (Contributor), Ivo Hofacker (Contributor) & Peter Stadler (Contributor)

  7 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Experiments in Deep Learning for RNA Secondary Structure Prediction

  Ivo Hofacker (Invited speaker)

  7 Aug 2022

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modeling the Kinetics of RNA-RNA Interaction Formation

  Maria Waldl (Contributor), Irene Katharina Beckmann-Schneider (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  31 May 2022

  Activity: Talks and presentations › Poster presentation › Science to Science

• Modelling the formation of RNA-RNA interactions in 3D

  Irene Katharina Beckmann-Schneider (Contributor), Maria Waldl (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  16 Dec 2021

  Activity: Talks and presentations › Poster presentation › Science to Science

• Deciphering viral RNA structure with ViennaRNA

  Michael Thomas Wolfinger (Speaker)

  22 Nov 2021

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• MODELING THE KINETICS OF RNA-RNA INTERACTION FORMATION

  Maria Waldl (Speaker), Irene Katharina Beckmann-Schneider (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  17 Nov 2021

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modelling the kinetics of RNA-RNA Interaction formation

  Maria Waldl (Contributor), Irene Katharina Beckmann-Schneider (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  28 Sep 2021

  Activity: Talks and presentations › Poster presentation › Science to Science

• Modelling RNA-RNA Interactions in 3D

  Irene Katharina Beckmann-Schneider (Contributor), Maria Waldl (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  28 Sep 2021

  Activity: Talks and presentations › Poster presentation › Science to Science

• Modified nucleotides in RNA sequences of tRNAdb database.

  Yuliia Varenyk (Contributor), Ronny Lorenz (Contributor) & Ivo Hofacker (Contributor)

  17 Sep 2021

  Activity: Talks and presentations › Poster presentation › Science to Science

• Lineage Size Evolution in Developing Organoids

  Arndt von Haeseler (Speaker)

  2 Mar 2021

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Lineage size evolution in developing organoids

  Arndt von Haeseler (Speaker)

  15 Feb 2021

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Modeling the formation of RNA-RNA interactions

  Maria Waldl (Contributor), Irene Katharina Beckmann (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  27 Nov 2020

  Activity: Talks and presentations › Poster presentation › Science to Science

• Conformation conditions of RNA-RNA interaction in 3D structure prediction

  Irene Katharina Beckmann (Contributor), Maria Waldl (Contributor), Sebastian Will (Contributor) & Ivo Hofacker (Contributor)

  27 Nov 2020

  Activity: Talks and presentations › Poster presentation › Science to Science

• The dynamics of cell division and differentiation in cerebral organoids

  Arndt von Haeseler (Speaker)

  26 Nov 2020

  Activity: Talks and presentations › Talk or oral contribution › Science to Science