Thomas Rattei

Activities

Activities per year 2010 2010 2011 2012 2013 2014 2015 2016 2017 2024

• 109 Talk or oral contribution
• 15 Poster presentation
• 1 Organisation of ...
• 1 Participation in ...

Activities per year

Search results

• From extreme environments to bioactive discoveries: Unveiling the potential of Antarctic bacteria

  Stanislava Bezdicek Kralova (Speaker), Mathias Flieder (Contributor), Peter Spacek (Contributor), Johannes Gafriller (Contributor), Ulrike Grienke (Contributor), Olga Sekurova (Contributor), Thomas Rattei (Contributor), Martin Zehl (Contributor), Sergey Zotchev (Contributor) & Alexander Loy (Contributor)

  Oct 2024

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• PyCoMo transparently facilitates creating and studying community metabolic models

  Marianne Mießkes (Contributor), Michael Predl (Contributor), Thomas Rattei (Contributor) & Jürgen Zanghellini (Contributor)

  24 Apr 2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• Unmasking nature's collaborators with PyCoMo: Computing all feasible compositions of microbial communities

  Marianne Mießkes (Contributor), Michael Predl (Contributor), Thomas Rattei (Contributor) & Jürgen Zanghellini (Contributor)

  18 Jan 2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• Deletions of conserved extracytoplasmic sigma factors in Streptomyces have a major impact on secondary metabolism

  Olga Sekurova (Selected presenter), Martin Zehl (Contributor), Michael Predl (Contributor), Peter Hunyadi (Contributor), Thomas Rattei (Contributor) & Sergey Zotchev (Contributor)

  2024

  Activity: Talks and presentations › Poster presentation › Science to Science

• PyCoMo: a python package for community metabolic model creation and analysis

  Michael Predl (Contributor), Marianne Mießkes (Contributor), Jürgen Zanghellini (Contributor) & Thomas Rattei (Contributor)

  12 Sept 2023

  Activity: Talks and presentations › Poster presentation › Science to Science

• Visualizing cross-feeding interactions in community metabolic models

  Michael Predl (Speaker), Marianne Mießkes (Contributor), Jürgen Zanghellini (Contributor) & Thomas Rattei (Contributor)

  28 Jun 2023

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Large-scale prediction of phenotypic traits from metagenomic bins

  Thomas Rattei (Speaker)

  20 May 2020

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Metagnome wide prediction of Type III secreted proteins

  Thomas Rattei (Speaker)

  7 May 2020

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• VOGDB- Virus Orthologous Groups

  Thomas Rattei (Speaker)

  5 Mar 2020

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Genomics of uncultivable microbes

  Thomas Rattei (Speaker)

  17 Feb 2020

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Genomics of marine nematode symbionts

  Tobias Viehböck (Contributor), Harald Gruber-Vodicka (Contributor), Patrick Hyden (Contributor), Thomas Rattei (Contributor) & Silvia Bulgheresi (Contributor)

  Dec 2019

  Activity: Talks and presentations › Poster presentation › Science to Science

• Computational modeling and learning methods for metagenomics of microbial and viral communities

  Thomas Rattei (Invited speaker)

  31 Oct 2019

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Genomics of marine nematode symbionts

  Tobias Viehböck (Contributor), Harald Gruber-Vodicka (Contributor), Patrick Hyden (Contributor), Thomas Rattei (Contributor) & Silvia Bulgheresi (Contributor)

  Sept 2019

  Activity: Talks and presentations › Poster presentation › Science to Science

• 21st Genomic Standards Consortium

  Thomas Rattei (Organiser) & Craig Herbold (Organiser)

  19 May 2019 → 23 May 2019

  Activity: Academic events › Organisation of ...

• Computational modeling and learning methods for metagenomics of microbial and viral communities

  Thomas Rattei (Invited speaker)

  21 Jan 2019

  Activity: Talks and presentations › Talk or oral contribution › Science to Public

• Computational infrastructure in life sciences

  Thomas Rattei (Speaker)

  16 Oct 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Die unbekannte Welt der MIkrobiome: Von der Umwelt zum Menschen

  Thomas Rattei (Speaker)

  16 Aug 2018 → 21 Aug 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Public

• Polyproteins: an obstacle for virus genome annotation

  Thomas Rattei (Speaker)

  1 May 2018 → 4 May 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Peatland Acidobacteria with a dissimilatory sulfur metabolism

  Bela Hausmann (Contributor), Claus Pelikan (Contributor), Craig Herbold (Contributor), Mads Albertsen (Contributor), Stephanie Eichorst (Contributor), Tijana Glavina Del Rio (Contributor), Martin Huemer (Contributor), Per Halkjaer Nielsen (Contributor), Thomas Rattei (Contributor), Ulrich Stingl (Contributor), Susannah G Tringe (Contributor), Daniela Trojan (Contributor), Cécilia Agnčs Wentrup (Contributor), Dagmar Wöbken (Contributor), Michael Pester (Contributor) & Alexander Loy (Contributor)

  Apr 2018

  Activity: Talks and presentations › Poster presentation › Science to Science

• Microbiomes in high definition

  Thomas Rattei (Speaker)

  19 Mar 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• 2nd Meeting of the ATBI workgroup infrastructure and HPC

  Thomas Rattei (Speaker)

  21 Feb 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Software Infrastructure for bioinformatics on LISC and VSC

  Thomas Rattei (Speaker)

  20 Feb 2018

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Bridge That Gap! – Insights from a long-term evolution experiment using strictly host-dependent bacteria

  Paul Herrera (Contributor), Lisa Natalie Schuster (Contributor), Markus Zojer (Contributor), Hyunsoo Na (Contributor), Jasmin Schwarz (Contributor), Florian Wascher (Contributor), Thomas Rattei (Contributor) & Matthias Horn (Contributor)

  2018

  Activity: Talks and presentations › Poster presentation › Science to Science

• How many bioinformaticians does it take to make a product ?

  Thomas Rattei (Invited speaker)

  16 Nov 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• CUBE - Division of Computational Systems Biology

  Thomas Rattei (Speaker)

  10 Nov 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Public

• Viral Protein Families

  Thomas Rattei (Invited speaker)

  4 Sept 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Deciphering the microbiome

  Thomas Rattei (Invited speaker)

  28 Jul 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• CUBE-Division of Computational Systems Biolog<

  Thomas Rattei (Invited speaker)

  26 Jun 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Public

• Large-scale prediction of microbial roles and traits

  Thomas Rattei (Invited speaker)

  1 Jun 2017 → 5 Jun 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Recent developments in bioinformatics in A and EU

  Thomas Rattei (Speaker)

  23 May 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Rare Actinomycete bacteria in the tissues of Leontopodium nivale subsp. alpinum (Edelweiss) and its rhizosphere

  Martina Oberhofer (Selected presenter), Marlene Leutgeb (Contributor), Thomas Rattei (Contributor) & Sergey Zotchev (Contributor)

  23 May 2017 → 27 May 2017

  Activity: Talks and presentations › Poster presentation › Science to Science

• Viral Protein Families

  Thomas Rattei (Invited speaker)

  13 May 2017 → 20 May 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Challenges and recent approaches in viral metagenomics

  Thomas Rattei (Speaker)

  6 May 2017 → 9 May 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Microbiomes in high definition

  Thomas Rattei (Invited speaker)

  23 Feb 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• Next Generation Bioinformatics for Genome-based Diagnostics

  Thomas Rattei (Invited speaker)

  7 Jan 2017 → 9 Jan 2017

  Activity: Talks and presentations › Talk or oral contribution › Science to Science

• The million genomes challenge: Large-scale annotation and phenotype prediction for microbial genomes.

  Thomas Rattei (Speaker)

  30 Nov 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• The Chlamydiae Genomes Reannotation Initiative.

  Thomas Rattei (Speaker)

  14 Oct 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• The million genomes challenge: Large-scale annotation and phenotype prediction for microbial genomes.

  Thomas Rattei (Speaker)

  12 Oct 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• Microbial genomes inside the mummy of the Iceman.

  Thomas Rattei (Speaker)

  19 Sept 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• Dynamics of rumen microbiome structure and function during plant biomass degradation revealed by integrated quantitative metatranscriptomics

  Andrea Söllinger (Contributor), Morten Poulsen (Contributor), Samantha Joan Noel (Contributor), Jörg Bernhardt (Contributor), Thomas Rattei (Contributor), Ole Hojberg (Contributor), Christa Schleper (Contributor) & Tim Urich (Contributor)

  23 Aug 2016

  Activity: Talks and presentations › Poster presentation › Science to Science

• Bioinformatics in Austria and ELIXIR.

  Thomas Rattei (Speaker)

  30 Jun 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• How clonal are bacterial infections?

  Thomas Rattei (Speaker)

  29 Apr 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• From genomes to networks: computational approaches for studying host-microbe interactions.

  Thomas Rattei (Speaker)

  28 Apr 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• The million genomes challenge: bioinformatics and HPC in microbial genomics.

  Thomas Rattei (Speaker)

  24 Feb 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• Microbiomes: from genomes to structure and function.

  Thomas Rattei (Speaker)

  19 Feb 2016

  Activity: Talks and presentations › Talk or oral contribution › Other

• From gene-centric to genome-centric metagenomics: new computational approaches and tools

  Thomas Rattei (Invited speaker)

  3 Dec 2015

  Activity: Talks and presentations › Talk or oral contribution › Other

• Status update on the bioinformatics community in Austria

  Thomas Rattei (Invited speaker)

  21 Oct 2015 → 23 Oct 2015

  Activity: Talks and presentations › Talk or oral contribution › Other

• The future of microbial genomics: next-generation bioinformatics for millions of genomes

  Thomas Rattei (Invited speaker)

  19 Oct 2015

  Activity: Talks and presentations › Talk or oral contribution › Other

• Mission accomplished? Critical evaluation of computational methods in metagenomics

  Thomas Rattei (Invited speaker)

  20 Sept 2015 → 22 Sept 2015

  Activity: Talks and presentations › Talk or oral contribution › Other

• From genomes to networks: computational approaches for studying microbe-host interactions.

  Thomas Rattei (Invited speaker)

  1 Jun 2015 → 3 Jun 2015

  Activity: Talks and presentations › Talk or oral contribution › Other