Towards Coarse-graining of Active Chromatin

Smrek, Jan (Project Lead)
Likos, Christos (Co-Lead)

Computational and Soft Matter Physics

Project: Research funding

9 Article
1 Review

10 results

2024
Topology in soft and biological matter
Topology_matter, Tubiana, L., Alexander, G. P., Barbensi, A., Buck, D., Cartwright, J. H. E., Chwastyk, M., Cieplak, M., Coluzza, I., Čopar, S., Craik, D. J., Di Stefano, M., Everaers, R., Faísca, P. F. N., Ferrari, F., Giacometti, A., Goundaroulis, D., Haglund, E., Hou, Y. M., Ilieva, N., & 40 othersJackson, S. E., Japaridze, A., Kaplan, N., Klotz, A. R., Li, H., Likos, C. N., Locatelli, E., López-León, T., Machon, T., Micheletti, C., Michieletto, D., Niemi, A., Niemyska, W., Niewieczerzal, S., Nitti, F., Orlandini, E., Pasquali, S., Perlinska, A. P., Podgornik, R., Potestio, R., Pugno, N. M., Ravnik, M., Ricca, R., Rohwer, C. M., Rosa, A., Smrek, J., Souslov, A., Stasiak, A., Steer, D., Sułkowska, J., Sułkowski, P., Sumners, D. W. L., Svaneborg, C., Szymczak, P., Tarenzi, T., Travasso, R., Virnau, P., Vlassopoulos, D., Ziherl, P. & Žumer, S., 18 Jul 2024, In: Physics Reports. 1075, p. 1-137 137 p.
Publications: Contribution to journal › Review › Peer Reviewed

Open Access
2022
Active Topological Glass Confined within a Spherical Cavity
Chubak, I., Pachong, S. M., Kremer, K., Likos, C. N. & Smrek, J., 8 Feb 2022, In: Macromolecules. 55, 3, p. 956–964 9 p.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
2021
Nanorheology of active-passive polymer mixtures differentiates between linear and ring polymer topology
Papale, A., Smrek, J. & Rosa, A., 14 Aug 2021, In: Soft Matter. 17, 30, p. 7111-7117 7 p.
Publications: Contribution to journal › Article › Peer Reviewed
Topological and threading effects in polydisperse ring polymer solutions
Chubak, I., Likos, C. N. & Smrek, J., 18 Oct 2021, In: Molecular Physics. 119, 19-20, 12 p., e1883140.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
Topological tuning of DNA mobility in entangled solutions of supercoiled plasmids
Smrek, J., Garamella, J., Robertson-Anderson, R. & Michieletto, D., 12 May 2021, In: Science Advances. 7, 20, 10 p., 9260.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
2020
Active topological glass
Smrek, J., Chubak, I., Likos, C. N. & Kremer, K., 7 Jan 2020, In: Nature Communications. 11, 1, 11 p., 26.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
Emergence of active topological glass through directed chain dynamics and nonequilibrium phase segregation
Chubak, I., Likos, C. N., Kremer, K. & Smrek, J., 18 Nov 2020, In: Physical Review Research. 2, 4, 17 p., 043249.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
Melts of nonconcatenated rings in spherical confinement
Pachong, S. M., Chubak, I., Kremer, K. & Smrek, J., 14 Aug 2020, In: Journal of Chemical Physics. 153, 6, 12 p., 064903.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
Threading-Induced Dynamical Transition in Tadpole-Shaped Polymers
Rosa, A., Smrek, J., Turner, M. S. & Michieletto, D., 5 May 2020, In: ACS Macro Letters. 9, 5, p. 743-748 6 p.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access
2019
Threading of Unconcatenated Ring Polymers at High Concentrations: Double-Folded vs Time-Equilibrated Structures
Smrek, J., Kremer, K. & Rosa, A., Feb 2019, In: ACS Macro Letters. 8, 2, p. 155-160 6 p.
Publications: Contribution to journal › Article › Peer Reviewed

Open Access

Towards Coarse-graining of Active Chromatin

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