A Revealed Imperfection in Concept Drift Correction in Metabolomics Modeling

  • Jana Schwarzerová (Corresponding author)
  • , Ales Kostoval
  • , Adam Bajger
  • , Lucia Jakubikova
  • , Iro Pierides
  • , Lubos Popelinsky
  • , Karel Sedlar
  • , Wolfram Weckwerth

Publications: Contribution to bookChapterPeer Reviewed

Abstract

Prediction models that rely on time series data are often affected by diminished predictive accuracy. This occurs from the causal relationships of the data that shift over time. Thus, the changing weights that are used to create prediction models lose their informational value. One way to correct this change is by using concept drift information. That is exactly what prediction models in biomedical applications need. Currently, metabolomics is at the forefront in modeling analysis for phenotype prediction, making it one of the most interesting candidates for biomedical prediction diagnosis. However, metabolomics datasets include dynamic information that can harm prediction modeling. The study presents concept drift correction methods to account for dynamic changes that occur in metabolomics data for better prediction outcomes of phenotypes in a biomedical setting.
Original languageEnglish
Title of host publicationInformation Technology in Biomedicine
Subtitle of host publication ITIB 2022. Advances in Intelligent Systems and Computing
Place of PublicationCham
PublisherSpringer
Pages498-509
ISBN (Print)978-3-031-09134-6
DOIs
Publication statusPublished - 22 Jun 2022

Publication series

SeriesAdvances in Intelligent Systems and Computing
ISSN2194-5357

Austrian Fields of Science 2012

  • 106057 Metabolomics
  • 101028 Mathematical modelling
  • 102019 Machine learning

Keywords

  • Biomedical analysis
  • Metabolomics
  • Machine learning
  • Prediction methods

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