Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period

Amine Namouchi; Meriam Guellil; Oliver Kersten; Stephanie Hansch; Claudio Ottoni; Boris V. Schmid; Elsa Pacciani; Luisa Quaglia; Marco Vermunt; Egil L. Bauer; Michael Derrick; Anne O. Jensen; Sacha Kacki; Samuel K. Cohn; Nils C. Stenseth; Barbara Bramanti

doi:10.1073/pnas.1812865115

Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period

Amine Namouchi
, Meriam Guellil
, Oliver Kersten
, Stephanie Hansch
, Claudio Ottoni
, Boris V. Schmid
, Elsa Pacciani
, Luisa Quaglia
, Marco Vermunt
, Egil L. Bauer
, Michael Derrick
, Anne O. Jensen
, Sacha Kacki
, Samuel K. Cohn
, Nils C. Stenseth
, Barbara Bramanti

Department of Evolutionary Anthropology

Publications: Contribution to journal › Article › Peer Reviewed

Original language	English
Pages (from-to)	E11790-E11797
Number of pages	8
Journal	Proceedings of the National Academy of Sciences of the United States of America
Volume	115
Issue number	50
DOIs	https://doi.org/10.1073/pnas.1812865115
Publication status	Published - 11 Dec 2018

Funding

We thank Lars Walloe for useful comments and discussion; and Joachim Burger for providing access to the aDNA facilities at the University of Mainz, Germany. This project was funded by the European Research Council (ERC) under the FP7-IDEAS-ERC Program (Grant 324249). Part of the data analysis was performed on the Abel Cluster, owned by the University of Oslo and the Norwegian metacenter for High Performance Computing (NOTUR) and operated by the Department for Research Computing at the University Center for Information Technology Services (USIT), University of Oslo. C.O. is funded by Satsningsmiljo Grant Comparative Infection Biology (COMPI), Department of Biosciences, University of Oslo.

Austrian Fields of Science 2012

106014 Genomics

Keywords

plague
Medieval
ancient DNA
Yersinia pestis
Second Pandemic
BLACK-DEATH
ANCIENT DNA
VISUALIZATION
PERFORMANCE
POPULATION
Ancient DNA
Plague

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10.1073/pnas.1812865115

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Namouchi, A., Guellil, M., Kersten, O., Hansch, S., Ottoni, C., Schmid, B. V., Pacciani, E., Quaglia, L., Vermunt, M., Bauer, E. L., Derrick, M., Jensen, A. O., Kacki, S., Cohn, S. K., Stenseth, N. C., & Bramanti, B. (2018). Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period. Proceedings of the National Academy of Sciences of the United States of America, 115(50), E11790-E11797. https://doi.org/10.1073/pnas.1812865115

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title = "Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period",

keywords = "plague, Medieval, ancient DNA, Yersinia pestis, Second Pandemic, BLACK-DEATH, ANCIENT DNA, VISUALIZATION, PERFORMANCE, POPULATION, Ancient DNA, Plague",

author = "Amine Namouchi and Meriam Guellil and Oliver Kersten and Stephanie Hansch and Claudio Ottoni and Schmid, \{Boris V.\} and Elsa Pacciani and Luisa Quaglia and Marco Vermunt and Bauer, \{Egil L.\} and Michael Derrick and Jensen, \{Anne O.\} and Sacha Kacki and Cohn, \{Samuel K.\} and Stenseth, \{Nils C.\} and Barbara Bramanti",

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doi = "10.1073/pnas.1812865115",

language = "English",

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Namouchi, A, Guellil, M, Kersten, O, Hansch, S, Ottoni, C, Schmid, BV, Pacciani, E, Quaglia, L, Vermunt, M, Bauer, EL, Derrick, M, Jensen, AO, Kacki, S, Cohn, SK, Stenseth, NC & Bramanti, B 2018, 'Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period', Proceedings of the National Academy of Sciences of the United States of America, vol. 115, no. 50, pp. E11790-E11797. https://doi.org/10.1073/pnas.1812865115

Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period. / Namouchi, Amine; Guellil, Meriam; Kersten, Oliver et al.
In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, No. 50, 11.12.2018, p. E11790-E11797.

Publications: Contribution to journal › Article › Peer Reviewed

TY - JOUR

T1 - Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period

AU - Namouchi, Amine

AU - Guellil, Meriam

AU - Kersten, Oliver

AU - Hansch, Stephanie

AU - Ottoni, Claudio

AU - Schmid, Boris V.

AU - Pacciani, Elsa

AU - Quaglia, Luisa

AU - Vermunt, Marco

AU - Bauer, Egil L.

AU - Derrick, Michael

AU - Jensen, Anne O.

AU - Kacki, Sacha

AU - Cohn, Samuel K.

AU - Stenseth, Nils C.

AU - Bramanti, Barbara

PY - 2018/12/11

Y1 - 2018/12/11

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KW - Medieval

KW - ancient DNA

KW - Yersinia pestis

KW - Second Pandemic

KW - BLACK-DEATH

KW - ANCIENT DNA

KW - VISUALIZATION

KW - PERFORMANCE

KW - POPULATION

KW - Ancient DNA

KW - Plague

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DO - 10.1073/pnas.1812865115

M3 - Article

SN - 0027-8424

VL - 115

SP - E11790-E11797

JO - Proceedings of the National Academy of Sciences of the United States of America

JF - Proceedings of the National Academy of Sciences of the United States of America

IS - 50

ER -

Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period

Funding

Austrian Fields of Science 2012

Keywords

Access to Document

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