LigandScout Remote: A new User-Friendly Interface for HPC and Cloud Resources

Thomas Kainrad (Corresponding author), Sascha Hunold (Corresponding author), Thomas Seidel, Thierry Langer

    Publications: Contribution to journalArticlePeer Reviewed

    Abstract

    High-performance computing (HPC) clusters play a major role in scientific research. However, working with these clusters is often cumbersome, especially for researchers without a formal background in computer science. It requires preparation and transfer of the input data, manual gathering of results, and command-line expertise. Current approaches for improving accessibility to remote HPC clusters are focused on providing web-based graphical front-ends that allow jobs to be submitted to the distributed resource management system running on the cluster. This comes with significant usability benefits over command-line usage but does not circumvent the need for manual handling of the input and output files. With LigandScout Remote, we propose a different solution. Our software enables the seamless integration of HPC resources into the LigandScout desktop application that scientists use also in their day-to-day work. By handling necessary data conversion and network communication transparently to the user, this approach completely evades any HPC usability barriers. We show that the developed software combines the usability of local graphical desktop applications with the performance of HPC clusters.

    Original languageEnglish
    Pages (from-to)31-37
    Number of pages7
    JournalJournal of Chemical Information and Modeling
    Volume59
    Issue number1
    DOIs
    Publication statusPublished - Jan 2019

    Austrian Fields of Science 2012

    • 301207 Pharmaceutical chemistry

    Keywords

    • CDK2
    • HIGH-PERFORMANCE

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