Abstract
Fed-batch processes are prevalent in biotechnological industries, but design of experiments often results in sub-optimal conditions due to incomplete solution space characterization. We employ a single-level dynamic control (DC) algorithm for dynamic flux balance analysis (dFBA), enhancing efficiency by reducing Karush-Kuhn-Tucker (KKT) condition constraints and adapting the algorithm for predicting optimal process length. In a growth-decoupled plasmid DNA production case study, we predict the optimal feeding profile and switching time between growth and production phase. Comparing our algorithm to its predecessor shows a speed-up of at least a factor of four. When the process length is part of the objective function the speed-up becomes considerably larger.
| Original language | English |
|---|---|
| Pages (from-to) | 109-114 |
| Number of pages | 6 |
| Journal | IFAC-PapersOnLine |
| Volume | 58 |
| Issue number | 23 |
| DOIs | |
| Publication status | Published - 1 Sept 2024 |
| Event | 10th IFAC Conference on Foundations of Systems Biology in Engineering, FOSBE 2024 - Corfu Island, Greece Duration: 8 Sept 2024 → 11 Sept 2024 |
Austrian Fields of Science 2012
- 104027 Computational chemistry
- 104002 Analytical chemistry
- 106005 Bioinformatics
Keywords
- bi-level optimization
- bioprocess control
- dynamic optimization
- moving finite elements
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