Ten simple rules for creating reusable pathway models for computational analysis and visualization

Kristina Hanspers; Martina Kutmon; Susan L. Coort; Daniela Digles; Lauren J. Dupuis; Friederike Ehrhart; Finterly Hu; Elisson N. Lopes; Marvin Martens; Nhung Pham; Woosub Shin; Denise N. Slenter; Andra Waagmeester; Egon L. Willighagen; Laurent A. Winckers; Chris T. Evelo; Alexander R. Pico

doi:10.1371/journal.pcbi.1009226

Ten simple rules for creating reusable pathway models for computational analysis and visualization

Kristina Hanspers
, Martina Kutmon
, Susan L. Coort
, Daniela Digles
, Lauren J. Dupuis
, Friederike Ehrhart
, Finterly Hu
, Elisson N. Lopes
, Marvin Martens
, Nhung Pham
, Woosub Shin
, Denise N. Slenter
, Andra Waagmeester
, Egon L. Willighagen
, Laurent A. Winckers
, Chris T. Evelo
, Alexander R. Pico (Corresponding author)

Department of Pharmaceutical Sciences

Publications: Contribution to journal › Editorial › Peer Reviewed

Original language	English
Article number	e1009226
Number of pages	14
Journal	PLoS Computational Biology
Volume	17
Issue number	8
DOIs	https://doi.org/10.1371/journal.pcbi.1009226
Publication status	Published - 19 Aug 2021

Austrian Fields of Science 2012

102035 Data science

Keywords

GENE
KNOWLEDGE
RESOURCE
PLATFORM
DATABASE

Access to Document

10.1371/journal.pcbi.1009226Licence: CC BY 4.0

https://phaidra.univie.ac.at/o:1603275Licence: CC BY 4.0

Cite this

Hanspers, K., Kutmon, M., Coort, S. L., Digles, D., Dupuis, L. J., Ehrhart, F., Hu, F., Lopes, E. N., Martens, M., Pham, N., Shin, W., Slenter, D. N., Waagmeester, A., Willighagen, E. L., Winckers, L. A., Evelo, C. T., & Pico, A. R. (2021). Ten simple rules for creating reusable pathway models for computational analysis and visualization. PLoS Computational Biology, 17(8), Article e1009226. https://doi.org/10.1371/journal.pcbi.1009226

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title = "Ten simple rules for creating reusable pathway models for computational analysis and visualization",

keywords = "GENE, KNOWLEDGE, RESOURCE, PLATFORM, DATABASE",

author = "Kristina Hanspers and Martina Kutmon and Coort, \{Susan L.\} and Daniela Digles and Dupuis, \{Lauren J.\} and Friederike Ehrhart and Finterly Hu and Lopes, \{Elisson N.\} and Marvin Martens and Nhung Pham and Woosub Shin and Slenter, \{Denise N.\} and Andra Waagmeester and Willighagen, \{Egon L.\} and Winckers, \{Laurent A.\} and Evelo, \{Chris T.\} and Pico, \{Alexander R.\}",

year = "2021",

month = aug,

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doi = "10.1371/journal.pcbi.1009226",

language = "English",

volume = "17",

journal = "PLoS Computational Biology",

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Hanspers, K, Kutmon, M, Coort, SL, Digles, D, Dupuis, LJ, Ehrhart, F, Hu, F, Lopes, EN, Martens, M, Pham, N, Shin, W, Slenter, DN, Waagmeester, A, Willighagen, EL, Winckers, LA, Evelo, CT & Pico, AR 2021, 'Ten simple rules for creating reusable pathway models for computational analysis and visualization', PLoS Computational Biology, vol. 17, no. 8, e1009226. https://doi.org/10.1371/journal.pcbi.1009226

TY - JOUR

T1 - Ten simple rules for creating reusable pathway models for computational analysis and visualization

AU - Hanspers, Kristina

AU - Kutmon, Martina

AU - Coort, Susan L.

AU - Digles, Daniela

AU - Dupuis, Lauren J.

AU - Ehrhart, Friederike

AU - Hu, Finterly

AU - Lopes, Elisson N.

AU - Martens, Marvin

AU - Pham, Nhung

AU - Shin, Woosub

AU - Slenter, Denise N.

AU - Waagmeester, Andra

AU - Willighagen, Egon L.

AU - Winckers, Laurent A.

AU - Evelo, Chris T.

AU - Pico, Alexander R.

PY - 2021/8/19

Y1 - 2021/8/19

KW - GENE

KW - KNOWLEDGE

KW - RESOURCE

KW - PLATFORM

KW - DATABASE

U2 - 10.1371/journal.pcbi.1009226

DO - 10.1371/journal.pcbi.1009226

M3 - Editorial

SN - 1553-734X

VL - 17

JO - PLoS Computational Biology

JF - PLoS Computational Biology

IS - 8

M1 - e1009226

ER -